Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sp140Q6NSQ5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sp140Q6NSQ5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sp140Q6NSQ5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sp140Q6NSQ5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Sp140Q6NSQ5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sp140Q6NSQ5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Gm11424-201ENSMUST00000121929 829 ntBASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Gm38092-201ENSMUST00000195600 653 ntBASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sp140Q6NSQ5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Gm12390-201ENSMUST00000117897 397 ntBASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sp140Q6NSQ5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms