Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ccne1Q61457 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccne1Q61457 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ccne1Q61457 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.39■□□□□ 0.21
Ccne1Q61457 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccne1Q61457 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccne1Q61457 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Ccne1Q61457 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Gm24231-201ENSMUST00000104315 133 ntBASIC16.39■□□□□ 0.21
Ccne1Q61457 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.39■□□□□ 0.21
Ccne1Q61457 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.39■□□□□ 0.21
Ccne1Q61457 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccne1Q61457 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccne1Q61457 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccne1Q61457 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccne1Q61457 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 AC154305.4-201ENSMUST00000224520 614 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Spcs1-203ENSMUST00000226374 592 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccne1Q61457 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.38■□□□□ 0.21
Ccne1Q61457 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms