Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.17■□□□□ 0.02
NfkbibQ60778 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NfkbibQ60778 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NfkbibQ60778 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NfkbibQ60778 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.16■□□□□ 0.02
NfkbibQ60778 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NfkbibQ60778 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NfkbibQ60778 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.16■□□□□ 0.02
NfkbibQ60778 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.16■□□□□ 0.02
NfkbibQ60778 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NfkbibQ60778 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NfkbibQ60778 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
NfkbibQ60778 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm12015-201ENSMUST00000117065 843 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm15808-201ENSMUST00000119046 604 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm9083-201ENSMUST00000120423 819 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm15276-201ENSMUST00000145953 498 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm44958-201ENSMUST00000203734 736 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm44967-201ENSMUST00000207047 631 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.15■□□□□ 0.02
NfkbibQ60778 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NfkbibQ60778 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.15■□□□□ 0.02
NfkbibQ60778 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm10312-201ENSMUST00000078515 489 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NfkbibQ60778 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.15■□□□□ 0.02
NfkbibQ60778 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.15■□□□□ 0.02
NfkbibQ60778 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NfkbibQ60778 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NfkbibQ60778 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.14■□□□□ 0.01
NfkbibQ60778 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NfkbibQ60778 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms