Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm27741-201ENSMUST00000185060 237 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm17837-201ENSMUST00000186435 985 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm38223-201ENSMUST00000194484 695 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm35960-201ENSMUST00000202712 767 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm12291-201ENSMUST00000121627 311 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm9063-201ENSMUST00000223299 582 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm8227-201ENSMUST00000223306 571 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms