Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps13aQ5H8C4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm14921-201ENSMUST00000118643 908 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm22146-201ENSMUST00000157397 288 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm3551-201ENSMUST00000190750 664 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps13aQ5H8C4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm24934-201ENSMUST00000103764 111 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm12579-201ENSMUST00000118040 783 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm15703-201ENSMUST00000120250 880 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm17070-201ENSMUST00000170463 784 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.18□□□□□ -0.46
Vps13aQ5H8C4 Gm45481-201ENSMUST00000209717 877 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms