Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm13171-201ENSMUST00000117233 391 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm11783-201ENSMUST00000119549 885 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm17214-201ENSMUST00000164501 541 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm9135-201ENSMUST00000182963 990 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm14193-201ENSMUST00000105067 153 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm11619-201ENSMUST00000117474 237 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm8731-201ENSMUST00000118088 412 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm11500-201ENSMUST00000118237 601 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm12291-201ENSMUST00000121627 311 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm25076-201ENSMUST00000104098 132 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm12419-201ENSMUST00000116649 636 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm25226-201ENSMUST00000158198 123 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm4654-201ENSMUST00000183305 982 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Spg11Q3UHA3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms