Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col5a2Q3U962 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm13263-201ENSMUST00000121271 838 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm19091-201ENSMUST00000208120 978 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm13600-201ENSMUST00000117949 744 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Col5a2Q3U962 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col5a2Q3U962 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.82□□□□□ -0.04
Col5a2Q3U962 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.81□□□□□ -0.04
Col5a2Q3U962 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.81□□□□□ -0.04
Col5a2Q3U962 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.81□□□□□ -0.04
Col5a2Q3U962 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col5a2Q3U962 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col5a2Q3U962 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms