Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm5904-201ENSMUST00000210286 865 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf1Q07802 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.85□□□□□ -0.35
Ebf1Q07802 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ebf1Q07802 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm7857-201ENSMUST00000117957 358 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm14277-201ENSMUST00000121195 360 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm8099-201ENSMUST00000200510 742 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.84□□□□□ -0.35
Ebf1Q07802 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf1Q07802 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ebf1Q07802 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ebf1Q07802 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf1Q07802 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.83□□□□□ -0.35
Ebf1Q07802 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf1Q07802 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf1Q07802 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf1Q07802 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ebf1Q07802 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.83□□□□□ -0.36
Ebf1Q07802 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.83□□□□□ -0.36
Ebf1Q07802 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.83□□□□□ -0.36
Ebf1Q07802 Gm25214-201ENSMUST00000104573 129 ntBASIC12.83□□□□□ -0.36
Ebf1Q07802 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Gm15547-201ENSMUST00000122152 333 ntBASIC12.83□□□□□ -0.36
Ebf1Q07802 B9d1os-201ENSMUST00000137010 674 ntBASIC12.83□□□□□ -0.36
Ebf1Q07802 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.83□□□□□ -0.36
Ebf1Q07802 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf1Q07802 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms