Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Col17a1Q07563 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Col17a1Q07563 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col17a1Q07563 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Gm7150-201ENSMUST00000122032 981 ntBASIC18.99■□□□□ 0.63
Col17a1Q07563 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC18.99■□□□□ 0.63
Col17a1Q07563 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
Col17a1Q07563 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col17a1Q07563 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm23745-201ENSMUST00000104230 125 ntBASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm25554-201ENSMUST00000158075 113 ntBASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm27826-201ENSMUST00000175282 255 ntBASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm44216-201ENSMUST00000203942 157 ntBASIC18.98■□□□□ 0.63
Col17a1Q07563 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm10263-201ENSMUST00000085163 300 ntBASIC18.98■□□□□ 0.63
Col17a1Q07563 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC18.98■□□□□ 0.63
Col17a1Q07563 Gm42872-201ENSMUST00000200026 1967 ntBASIC18.98■□□□□ 0.63
Col17a1Q07563 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col17a1Q07563 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm25830-201ENSMUST00000158923 132 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Col17a1Q07563 AC156790.2-201ENSMUST00000227115 568 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Col17a1Q07563 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC18.97■□□□□ 0.63
Col17a1Q07563 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col17a1Q07563 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm12164-201ENSMUST00000121695 551 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm13827-201ENSMUST00000148801 372 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm22763-201ENSMUST00000158374 107 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm26174-201ENSMUST00000158415 219 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm8226-201ENSMUST00000190511 798 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Col17a1Q07563 AC154477.1-201ENSMUST00000226515 773 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 AC137842.2-201ENSMUST00000227734 797 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm4978-201ENSMUST00000071565 801 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gm23105-201ENSMUST00000083719 134 ntBASIC18.97■□□□□ 0.63
Col17a1Q07563 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Col17a1Q07563 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col17a1Q07563 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC18.96■□□□□ 0.63
Col17a1Q07563 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col17a1Q07563 Gm14006-201ENSMUST00000122132 981 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms