Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.29■□□□□ 0.04
Snai1Q02085 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.29■□□□□ 0.04
Snai1Q02085 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.29■□□□□ 0.04
Snai1Q02085 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Gm23085-201ENSMUST00000157849 293 ntBASIC15.29■□□□□ 0.04
Snai1Q02085 Gm8343-201ENSMUST00000182705 994 ntBASIC15.29■□□□□ 0.04
Snai1Q02085 Gm43184-201ENSMUST00000197247 542 ntBASIC15.29■□□□□ 0.04
Snai1Q02085 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Gm4607-201ENSMUST00000206649 577 ntBASIC15.29■□□□□ 0.04
Snai1Q02085 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Snai1Q02085 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.29■□□□□ 0.04
Snai1Q02085 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.29■□□□□ 0.04
Snai1Q02085 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snai1Q02085 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Snai1Q02085 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Snai1Q02085 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm26286-201ENSMUST00000104166 134 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Gm14724-201ENSMUST00000118400 537 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Gm7722-201ENSMUST00000120646 741 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Gm14460-201ENSMUST00000121511 639 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.28■□□□□ 0.04
Snai1Q02085 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm8100-201ENSMUST00000182906 988 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.28■□□□□ 0.04
Snai1Q02085 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.28■□□□□ 0.04
Snai1Q02085 Mir7686-201ENSMUST00000200604 57 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Snai1Q02085 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.28■□□□□ 0.04
Snai1Q02085 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Snai1Q02085 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Snai1Q02085 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.28■□□□□ 0.04
Snai1Q02085 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.28■□□□□ 0.04
Snai1Q02085 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.28■□□□□ 0.04
Snai1Q02085 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Snai1Q02085 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Gm12857-201ENSMUST00000117678 592 ntBASIC15.27■□□□□ 0.04
Snai1Q02085 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Gm13888-201ENSMUST00000119148 422 ntBASIC15.27■□□□□ 0.04
Snai1Q02085 Gm8199-201ENSMUST00000121323 823 ntBASIC15.27■□□□□ 0.04
Snai1Q02085 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Rprl1-201ENSMUST00000158050 327 ntBASIC15.27■□□□□ 0.04
Snai1Q02085 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Snai1Q02085 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Snai1Q02085 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.27■□□□□ 0.04
Snai1Q02085 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Snai1Q02085 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.27■□□□□ 0.04
Snai1Q02085 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Snai1Q02085 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.27■□□□□ 0.03
Snai1Q02085 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Snai1Q02085 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.27■□□□□ 0.03
Snai1Q02085 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Snai1Q02085 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms