Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm13047-201ENSMUST00000117116 815 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm12029-201ENSMUST00000120073 832 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm11978-201ENSMUST00000122315 466 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm22121-201ENSMUST00000175148 54 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm19353-201ENSMUST00000184561 445 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 AC124457.1-201ENSMUST00000198845 120 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm17812-201ENSMUST00000204935 318 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm7600-201ENSMUST00000209657 785 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm10312-201ENSMUST00000078515 489 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm10179-201ENSMUST00000086233 688 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.81□□□□□ -0.68
Col8a1Q00780 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.81□□□□□ -0.68
Col8a1Q00780 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a1Q00780 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm12058-201ENSMUST00000118614 437 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm14704-201ENSMUST00000120300 874 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.8□□□□□ -0.68
Col8a1Q00780 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a1Q00780 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Col8a1Q00780 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a1Q00780 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.79□□□□□ -0.68
Col8a1Q00780 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.79□□□□□ -0.68
Col8a1Q00780 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a1Q00780 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a1Q00780 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.79□□□□□ -0.68
Col8a1Q00780 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.79□□□□□ -0.68
Col8a1Q00780 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a1Q00780 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms