Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabpb1Q00420 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm15824-201ENSMUST00000119516 955 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm17150-201ENSMUST00000165577 381 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.85□□□□□ -0.35
Gabpb1Q00420 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabpb1Q00420 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gm12390-201ENSMUST00000117897 397 ntBASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gm14127-201ENSMUST00000117906 678 ntBASIC12.84□□□□□ -0.35
Gabpb1Q00420 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gm19184-201ENSMUST00000196798 928 ntBASIC12.84□□□□□ -0.35
Gabpb1Q00420 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.84□□□□□ -0.35
Gabpb1Q00420 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabpb1Q00420 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gabpb1Q00420 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gabpb1Q00420 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gabpb1Q00420 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gabpb1Q00420 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Gabpb1Q00420 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Gabpb1Q00420 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms