Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sssca1P56873 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.22□□□□□ -0.77
Sssca1P56873 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sssca1P56873 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Sssca1P56873 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Sssca1P56873 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sssca1P56873 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sssca1P56873 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sssca1P56873 Syt7-204ENSMUST00000223586 1344 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.22□□□□□ -0.77
Sssca1P56873 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Sssca1P56873 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.22□□□□□ -0.77
Sssca1P56873 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.22□□□□□ -0.77
Sssca1P56873 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sssca1P56873 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sssca1P56873 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Sssca1P56873 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.21□□□□□ -0.77
Sssca1P56873 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sssca1P56873 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.21□□□□□ -0.77
Sssca1P56873 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sssca1P56873 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.21□□□□□ -0.77
Sssca1P56873 Gm9630-201ENSMUST00000178304 885 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Gm19184-201ENSMUST00000196798 928 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Gm42612-201ENSMUST00000197986 623 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Gm43170-201ENSMUST00000199827 612 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Gm18307-201ENSMUST00000206864 949 ntBASIC10.21□□□□□ -0.77
Sssca1P56873 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sssca1P56873 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sssca1P56873 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Sssca1P56873 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.21□□□□□ -0.78
Sssca1P56873 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Sssca1P56873 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.21□□□□□ -0.78
Sssca1P56873 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sssca1P56873 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.2□□□□□ -0.78
Sssca1P56873 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sssca1P56873 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sssca1P56873 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms