Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Gm3928-201ENSMUST00000121141 1307 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Xcl1P47993 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 AC147366.1-201ENSMUST00000227671 852 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 Mir497b-201ENSMUST00000093601 125 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Xcl1P47993 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Xcl1P47993 Gm6756-201ENSMUST00000180647 1620 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC8.13□□□□□ -1.11
Xcl1P47993 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Xcl1P47993 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Xcl1P47993 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 AC154176.2-201ENSMUST00000225376 6429 ntBASIC8.13□□□□□ -1.11
Xcl1P47993 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Xcl1P47993 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Xcl1P47993 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Xcl1P47993 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.12□□□□□ -1.11
Xcl1P47993 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC8.12□□□□□ -1.11
Xcl1P47993 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC8.12□□□□□ -1.11
Xcl1P47993 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Xcl1P47993 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC8.12□□□□□ -1.11
Xcl1P47993 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC8.12□□□□□ -1.11
Xcl1P47993 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC8.12□□□□□ -1.11
Xcl1P47993 AA619741-201ENSMUST00000195095 646 ntBASIC8.12□□□□□ -1.11
Xcl1P47993 Gm43935-201ENSMUST00000203569 1050 ntBASIC8.12□□□□□ -1.11
Xcl1P47993 Gm4971-201ENSMUST00000205991 1108 ntBASIC8.12□□□□□ -1.11
Xcl1P47993 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC8.12□□□□□ -1.11
Xcl1P47993 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC8.12□□□□□ -1.11
Xcl1P47993 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Xcl1P47993 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms