Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.27□□□□□ -0.45
Sox18P43680 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox18P43680 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox18P43680 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.26□□□□□ -0.45
Sox18P43680 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm9540-201ENSMUST00000188230 478 ntBASIC12.26□□□□□ -0.45
Sox18P43680 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.26□□□□□ -0.45
Sox18P43680 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.26□□□□□ -0.45
Sox18P43680 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.26□□□□□ -0.45
Sox18P43680 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.26□□□□□ -0.45
Sox18P43680 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.26□□□□□ -0.45
Sox18P43680 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox18P43680 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox18P43680 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.26□□□□□ -0.45
Sox18P43680 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox18P43680 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox18P43680 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.25□□□□□ -0.45
Sox18P43680 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.25□□□□□ -0.45
Sox18P43680 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox18P43680 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox18P43680 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox18P43680 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox18P43680 Gm25043-201ENSMUST00000158604 212 ntBASIC12.25□□□□□ -0.45
Sox18P43680 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox18P43680 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox18P43680 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox18P43680 Gm7003-201ENSMUST00000195089 312 ntBASIC12.25□□□□□ -0.45
Sox18P43680 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox18P43680 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox18P43680 Ntng1-201ENSMUST00000051253 327 ntBASIC12.25□□□□□ -0.45
Sox18P43680 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sox18P43680 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox18P43680 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.25□□□□□ -0.45
Sox18P43680 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox18P43680 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox18P43680 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox18P43680 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms