Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.59□□□□□ -0.55
Nkx2-2P42586 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gm5187-201ENSMUST00000117317 991 ntBASIC11.59□□□□□ -0.55
Nkx2-2P42586 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gm44405-201ENSMUST00000198952 126 ntBASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gm45925-201ENSMUST00000218882 744 ntBASIC11.59□□□□□ -0.55
Nkx2-2P42586 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Nkx2-2P42586 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-2P42586 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx2-2P42586 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx2-2P42586 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx2-2P42586 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm13315-201ENSMUST00000120376 991 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm37424-201ENSMUST00000191727 561 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.58□□□□□ -0.56
Nkx2-2P42586 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-2P42586 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms