Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ccl1P10146 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccl1P10146 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.79□□□□□ -0.84
Ccl1P10146 Gm7063-201ENSMUST00000186840 981 ntBASIC9.79□□□□□ -0.84
Ccl1P10146 Gm28630-201ENSMUST00000187806 498 ntBASIC9.79□□□□□ -0.84
Ccl1P10146 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.79□□□□□ -0.84
Ccl1P10146 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ccl1P10146 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccl1P10146 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccl1P10146 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.78□□□□□ -0.84
Ccl1P10146 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ccl1P10146 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccl1P10146 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccl1P10146 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Gm27622-201ENSMUST00000183779 60 ntBASIC9.78□□□□□ -0.84
Ccl1P10146 Gm27533-201ENSMUST00000183800 152 ntBASIC9.78□□□□□ -0.84
Ccl1P10146 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccl1P10146 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Ccl1P10146 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ccl1P10146 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ccl1P10146 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccl1P10146 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl1P10146 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl1P10146 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl1P10146 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.77□□□□□ -0.84
Ccl1P10146 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl1P10146 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.77□□□□□ -0.85
Ccl1P10146 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl1P10146 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms