Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm23251-201ENSMUST00000103773 110 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm13461-201ENSMUST00000120980 662 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hoxc9P09633 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxc9P09633 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Gm12165-201ENSMUST00000117047 342 ntBASIC16.29■□□□□ 0.2
Hoxc9P09633 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.29■□□□□ 0.2
Hoxc9P09633 Gm27530-201ENSMUST00000184096 98 ntBASIC16.29■□□□□ 0.2
Hoxc9P09633 Gm3508-201ENSMUST00000186012 792 ntBASIC16.29■□□□□ 0.2
Hoxc9P09633 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.29■□□□□ 0.2
Hoxc9P09633 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.29■□□□□ 0.2
Hoxc9P09633 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxc9P09633 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxc9P09633 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxc9P09633 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc9P09633 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
Hoxc9P09633 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm11941-201ENSMUST00000119904 610 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 AC133602.1-201ENSMUST00000227510 509 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm21811-201ENSMUST00000096485 930 ntBASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxc9P09633 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxc9P09633 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms