Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.98□□□□□ -0.49
ApoeP08226 Gm5687-201ENSMUST00000118252 640 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ApoeP08226 Gm13689-201ENSMUST00000119360 685 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.98□□□□□ -0.49
ApoeP08226 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Gm5354-201ENSMUST00000182417 973 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Gm29667-201ENSMUST00000190817 490 ntBASIC11.98□□□□□ -0.49
ApoeP08226 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.98□□□□□ -0.49
ApoeP08226 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Mir339-201ENSMUST00000083659 96 ntBASIC11.98□□□□□ -0.49
ApoeP08226 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ApoeP08226 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ApoeP08226 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ApoeP08226 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
ApoeP08226 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.97□□□□□ -0.49
ApoeP08226 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.97□□□□□ -0.49
ApoeP08226 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Gm14760-201ENSMUST00000121831 999 ntBASIC11.97□□□□□ -0.49
ApoeP08226 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Gm28760-201ENSMUST00000185995 736 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Gm42599-201ENSMUST00000201308 469 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Itm2b-204ENSMUST00000228637 783 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.97□□□□□ -0.49
ApoeP08226 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.97□□□□□ -0.49
ApoeP08226 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
ApoeP08226 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ApoeP08226 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.96□□□□□ -0.49
ApoeP08226 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.96□□□□□ -0.49
ApoeP08226 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.96□□□□□ -0.49
ApoeP08226 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ApoeP08226 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms