Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Col4a1P02463 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a1P02463 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.24■□□□□ 0.03
Col4a1P02463 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.24■□□□□ 0.03
Col4a1P02463 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.24■□□□□ 0.03
Col4a1P02463 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.24■□□□□ 0.03
Col4a1P02463 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.24■□□□□ 0.03
Col4a1P02463 Gm43184-201ENSMUST00000197247 542 ntBASIC15.24■□□□□ 0.03
Col4a1P02463 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.24■□□□□ 0.03
Col4a1P02463 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col4a1P02463 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a1P02463 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.23■□□□□ 0.03
Col4a1P02463 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col4a1P02463 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.23■□□□□ 0.03
Col4a1P02463 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col4a1P02463 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col4a1P02463 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Gm8100-201ENSMUST00000182906 988 ntBASIC15.23■□□□□ 0.03
Col4a1P02463 Gm37905-201ENSMUST00000195310 341 ntBASIC15.23■□□□□ 0.03
Col4a1P02463 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.23■□□□□ 0.03
Col4a1P02463 Gm43520-201ENSMUST00000197996 164 ntBASIC15.23■□□□□ 0.03
Col4a1P02463 Gm9463-201ENSMUST00000206707 601 ntBASIC15.23■□□□□ 0.03
Col4a1P02463 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.23■□□□□ 0.03
Col4a1P02463 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.23■□□□□ 0.03
Col4a1P02463 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.23■□□□□ 0.03
Col4a1P02463 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a1P02463 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.22■□□□□ 0.03
Col4a1P02463 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Col4a1P02463 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Col4a1P02463 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.22■□□□□ 0.03
Col4a1P02463 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.22■□□□□ 0.03
Col4a1P02463 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col4a1P02463 Gm10288-201ENSMUST00000084614 537 ntBASIC15.22■□□□□ 0.03
Col4a1P02463 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col4a1P02463 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col4a1P02463 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col4a1P02463 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col4a1P02463 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col4a1P02463 Gm14724-201ENSMUST00000118400 537 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms