Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Gm12341-201ENSMUST00000119724 503 ntBASIC11.47□□□□□ -0.57
Rnf13O54965 Gm12291-201ENSMUST00000121627 311 ntBASIC11.47□□□□□ -0.57
Rnf13O54965 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Rnf13O54965 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf13O54965 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.47□□□□□ -0.57
Rnf13O54965 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.47□□□□□ -0.57
Rnf13O54965 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.47□□□□□ -0.57
Rnf13O54965 Gm44855-201ENSMUST00000205725 362 ntBASIC11.47□□□□□ -0.57
Rnf13O54965 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf13O54965 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf13O54965 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Rnf13O54965 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.47□□□□□ -0.57
Rnf13O54965 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf13O54965 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf13O54965 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Rnf13O54965 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf13O54965 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Gm9630-201ENSMUST00000178304 885 ntBASIC11.46□□□□□ -0.57
Rnf13O54965 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Rnf13O54965 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.46□□□□□ -0.57
Rnf13O54965 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf13O54965 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.46□□□□□ -0.57
Rnf13O54965 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.46□□□□□ -0.57
Rnf13O54965 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf13O54965 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Rnf13O54965 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Rnf13O54965 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf13O54965 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.46□□□□□ -0.58
Rnf13O54965 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rnf13O54965 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Rnf13O54965 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rnf13O54965 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf13O54965 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.46□□□□□ -0.58
Rnf13O54965 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf13O54965 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rnf13O54965 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf13O54965 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf13O54965 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.45□□□□□ -0.58
Rnf13O54965 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rnf13O54965 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.45□□□□□ -0.58
Rnf13O54965 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.45□□□□□ -0.58
Rnf13O54965 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.45□□□□□ -0.58
Rnf13O54965 Gm28631-201ENSMUST00000190740 334 ntBASIC11.45□□□□□ -0.58
Rnf13O54965 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.45□□□□□ -0.58
Rnf13O54965 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.45□□□□□ -0.58
Rnf13O54965 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rnf13O54965 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf13O54965 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf13O54965 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms