Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Gm15653-201ENSMUST00000119247 907 ntBASIC11.51□□□□□ -0.57
Matn3O35701 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.51□□□□□ -0.57
Matn3O35701 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.51□□□□□ -0.57
Matn3O35701 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Gm28630-201ENSMUST00000187806 498 ntBASIC11.51□□□□□ -0.57
Matn3O35701 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Matn3O35701 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.51□□□□□ -0.57
Matn3O35701 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.51□□□□□ -0.57
Matn3O35701 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.51□□□□□ -0.57
Matn3O35701 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Matn3O35701 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Matn3O35701 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Matn3O35701 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Gm14767-201ENSMUST00000121559 586 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.5□□□□□ -0.57
Matn3O35701 Gm18905-201ENSMUST00000205454 928 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.5□□□□□ -0.57
Matn3O35701 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Matn3O35701 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.5□□□□□ -0.57
Matn3O35701 Shd-206ENSMUST00000225145 998 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Matn3O35701 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.5□□□□□ -0.57
Matn3O35701 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.5□□□□□ -0.57
Matn3O35701 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Matn3O35701 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Matn3O35701 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Matn3O35701 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.49□□□□□ -0.57
Matn3O35701 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.49□□□□□ -0.57
Matn3O35701 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.49□□□□□ -0.57
Matn3O35701 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Matn3O35701 Gm12585-201ENSMUST00000117307 290 ntBASIC11.49□□□□□ -0.57
Matn3O35701 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.49□□□□□ -0.57
Matn3O35701 Gm38144-201ENSMUST00000192790 465 ntBASIC11.49□□□□□ -0.57
Matn3O35701 Gm38294-201ENSMUST00000192831 381 ntBASIC11.49□□□□□ -0.57
Matn3O35701 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Matn3O35701 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms