Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Npc1O35604 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.36□□□□□ -0.43
Npc1O35604 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.36□□□□□ -0.43
Npc1O35604 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Npc1O35604 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Olfr284-202ENSMUST00000206647 966 ntBASIC12.36□□□□□ -0.43
Npc1O35604 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.36□□□□□ -0.43
Npc1O35604 Gm18935-201ENSMUST00000212692 664 ntBASIC12.36□□□□□ -0.43
Npc1O35604 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Npc1O35604 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npc1O35604 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.36□□□□□ -0.43
Npc1O35604 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.36□□□□□ -0.43
Npc1O35604 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.35□□□□□ -0.43
Npc1O35604 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Gm12241-201ENSMUST00000118330 726 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.35□□□□□ -0.43
Npc1O35604 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Npc1O35604 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Npc1O35604 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Npc1O35604 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.35□□□□□ -0.43
Npc1O35604 Gm5904-201ENSMUST00000210286 865 ntBASIC12.35□□□□□ -0.43
Npc1O35604 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.35□□□□□ -0.43
Npc1O35604 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 Gm9368-201ENSMUST00000219348 831 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Gm7046-201ENSMUST00000221351 977 ntBASIC12.35□□□□□ -0.43
Npc1O35604 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Gm9823-201ENSMUST00000051212 327 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Gm24526-201ENSMUST00000082921 158 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Npc1O35604 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npc1O35604 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.35□□□□□ -0.43
Npc1O35604 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.35□□□□□ -0.43
Npc1O35604 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Npc1O35604 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Npc1O35604 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.34□□□□□ -0.43
Npc1O35604 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.34□□□□□ -0.43
Npc1O35604 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms