Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Gm5537-201ENSMUST00000091117 1252 ntBASIC19.1■□□□□ 0.65
Polr1aO35134 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr1aO35134 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Polr1aO35134 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Polr1aO35134 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Gm37691-201ENSMUST00000192147 2573 ntBASIC19.09■□□□□ 0.65
Polr1aO35134 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Polr1aO35134 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Gm15566-201ENSMUST00000121130 590 ntBASIC19.09■□□□□ 0.65
Polr1aO35134 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Polr1aO35134 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC19.09■□□□□ 0.65
Polr1aO35134 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Gm4034-201ENSMUST00000187674 480 ntBASIC19.09■□□□□ 0.65
Polr1aO35134 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC19.09■□□□□ 0.65
Polr1aO35134 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Polr1aO35134 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Polr1aO35134 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Polr1aO35134 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Polr1aO35134 Mir1901-201ENSMUST00000122616 78 ntBASIC19.08■□□□□ 0.65
Polr1aO35134 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Gm3150-201ENSMUST00000166418 204 ntBASIC19.08■□□□□ 0.65
Polr1aO35134 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC19.08■□□□□ 0.65
Polr1aO35134 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC19.08■□□□□ 0.65
Polr1aO35134 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Polr1aO35134 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Gm43267-201ENSMUST00000199664 1796 ntBASIC19.08■□□□□ 0.65
Polr1aO35134 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Polr1aO35134 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC19.08■□□□□ 0.65
Polr1aO35134 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Gm13910-201ENSMUST00000121752 1428 ntBASIC19.08■□□□□ 0.64
Polr1aO35134 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC19.08■□□□□ 0.64
Polr1aO35134 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
Polr1aO35134 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Gm9358-201ENSMUST00000183067 927 ntBASIC19.08■□□□□ 0.64
Polr1aO35134 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC19.08■□□□□ 0.64
Polr1aO35134 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC19.08■□□□□ 0.64
Polr1aO35134 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC19.08■□□□□ 0.64
Polr1aO35134 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC19.08■□□□□ 0.64
Polr1aO35134 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC19.08■□□□□ 0.64
Polr1aO35134 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Polr1aO35134 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.08■□□□□ 0.64
Polr1aO35134 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC19.07■□□□□ 0.64
Polr1aO35134 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC19.07■□□□□ 0.64
Polr1aO35134 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC19.07■□□□□ 0.64
Polr1aO35134 Gm8492-201ENSMUST00000182375 987 ntBASIC19.07■□□□□ 0.64
Polr1aO35134 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC19.07■□□□□ 0.64
Polr1aO35134 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Polr1aO35134 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Polr1aO35134 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC19.07■□□□□ 0.64
Polr1aO35134 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Polr1aO35134 Gm43677-201ENSMUST00000198098 2378 ntBASIC19.07■□□□□ 0.64
Polr1aO35134 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC19.07■□□□□ 0.64
Polr1aO35134 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Polr1aO35134 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Polr1aO35134 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms