Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.34□□□□□ -0.59
Shank1D3YZU1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm12266-201ENSMUST00000120311 962 ntBASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm8365-201ENSMUST00000197334 648 ntBASIC11.34□□□□□ -0.59
Shank1D3YZU1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shank1D3YZU1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Shank1D3YZU1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Shank1D3YZU1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.33□□□□□ -0.6
Shank1D3YZU1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Gm11450-201ENSMUST00000121144 333 ntBASIC11.33□□□□□ -0.6
Shank1D3YZU1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.33□□□□□ -0.6
Shank1D3YZU1 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Mir6546-201ENSMUST00000184460 62 ntBASIC11.33□□□□□ -0.6
Shank1D3YZU1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.33□□□□□ -0.6
Shank1D3YZU1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Gm10179-201ENSMUST00000086233 688 ntBASIC11.33□□□□□ -0.6
Shank1D3YZU1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms