Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm24845-201ENSMUST00000158034 109 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm8018-201ENSMUST00000173536 789 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm9211-201ENSMUST00000182882 975 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm38210-201ENSMUST00000191944 809 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.68□□□□□ -0.7
Col6a4A2AX52 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a4A2AX52 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a4A2AX52 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm9358-201ENSMUST00000183067 927 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gzmn-202ENSMUST00000225535 989 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms