Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav8-1A0A075B641 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms