Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gm5538W4VSP6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5538W4VSP6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5538W4VSP6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm5538W4VSP6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Gm5370-201ENSMUST00000187187 574 ntBASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Gm38158-201ENSMUST00000194617 339 ntBASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Gm9823-201ENSMUST00000051212 327 ntBASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.91□□□□□ -0.34
Gm5538W4VSP6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm5538W4VSP6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm14127-201ENSMUST00000117906 678 ntBASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm8062-201ENSMUST00000139696 444 ntBASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm18062-201ENSMUST00000208020 547 ntBASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm18055-201ENSMUST00000208254 547 ntBASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm5186-201ENSMUST00000218781 920 ntBASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm5538W4VSP6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm5538W4VSP6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm5538W4VSP6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms