Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Gm13665-201ENSMUST00000120830 528 ntBASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf13bQ9WU72 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm12015-201ENSMUST00000117065 843 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm2383-201ENSMUST00000181461 807 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm45186-201ENSMUST00000206874 478 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf13bQ9WU72 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.65□□□□□ -0.22
Tnfsf13bQ9WU72 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms