Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim39Q9ESN2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm6745-201ENSMUST00000199216 526 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm45841-201ENSMUST00000207700 164 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim39Q9ESN2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim39Q9ESN2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms