Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gm9063-201ENSMUST00000223299 582 ntBASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gm26035-201ENSMUST00000083065 308 ntBASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.44□□□□□ -0.58
Krt88Q9CPR6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm9522-201ENSMUST00000182394 926 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm38223-201ENSMUST00000194484 695 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm20949-201ENSMUST00000206478 952 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Krt88Q9CPR6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.42□□□□□ -0.58
Krt88Q9CPR6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms