Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm11637-201ENSMUST00000120601 592 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm28975-201ENSMUST00000186412 686 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.65□□□□□ -0.38
Trim33Q99PP7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim33Q99PP7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim33Q99PP7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim33Q99PP7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim33Q99PP7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm26185-201ENSMUST00000157692 266 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm23757-201ENSMUST00000158353 100 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.64□□□□□ -0.39
Trim33Q99PP7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim33Q99PP7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.63□□□□□ -0.39
Trim33Q99PP7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Gm11425-201ENSMUST00000119608 498 ntBASIC12.63□□□□□ -0.39
Trim33Q99PP7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms