Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.31□□□□□ -0.44
Rnf111Q99ML9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf111Q99ML9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Mir1894-201ENSMUST00000122802 81 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf111Q99ML9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf111Q99ML9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms