Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.95□□□□□ -0.02
Col20a1Q923P0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col20a1Q923P0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm18212-201ENSMUST00000211678 889 ntBASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.94□□□□□ -0.02
Col20a1Q923P0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.94□□□□□ -0.02
Col20a1Q923P0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col20a1Q923P0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.93□□□□□ -0.02
Col20a1Q923P0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Gm44651-201ENSMUST00000207343 372 ntBASIC14.93□□□□□ -0.02
Col20a1Q923P0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Col20a1Q923P0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col20a1Q923P0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col20a1Q923P0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col20a1Q923P0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col20a1Q923P0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.92□□□□□ -0.02
Col20a1Q923P0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col20a1Q923P0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.92□□□□□ -0.02
Col20a1Q923P0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms