Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm37042-201ENSMUST00000193816 581 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.67□□□□□ -0.06
Smc1bQ920F6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc1bQ920F6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.66□□□□□ -0.06
Smc1bQ920F6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm7857-201ENSMUST00000117957 358 ntBASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm5523-201ENSMUST00000180415 997 ntBASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.66□□□□□ -0.06
Smc1bQ920F6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.66□□□□□ -0.06
Smc1bQ920F6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.66□□□□□ -0.06
Smc1bQ920F6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc1bQ920F6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Gm14130-201ENSMUST00000118417 987 ntBASIC14.65□□□□□ -0.06
Smc1bQ920F6 Gm12217-201ENSMUST00000118858 696 ntBASIC14.65□□□□□ -0.06
Smc1bQ920F6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smc1bQ920F6 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.65□□□□□ -0.06
Smc1bQ920F6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc1bQ920F6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smc1bQ920F6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms