Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm19931-201ENSMUST00000198920 368 ntBASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a6Q8C6K9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Rmrp-201ENSMUST00000157463 271 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm27627-201ENSMUST00000183644 150 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Gm45925-201ENSMUST00000218882 744 ntBASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col6a6Q8C6K9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Gm9211-201ENSMUST00000182882 975 ntBASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Gm39404-201ENSMUST00000216350 313 ntBASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Gm10179-201ENSMUST00000086233 688 ntBASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Col6a6Q8C6K9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms