Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.98□□□□□ -0.33
Sfr1Q8BP27 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm12957-201ENSMUST00000117835 377 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm14921-201ENSMUST00000118643 908 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm16379-201ENSMUST00000161469 348 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm8762-201ENSMUST00000193486 339 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.97□□□□□ -0.33
Sfr1Q8BP27 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Gm23363-201ENSMUST00000175024 79 ntBASIC12.96□□□□□ -0.33
Sfr1Q8BP27 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sfr1Q8BP27 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms