Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm11439-201ENSMUST00000118598 409 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm14109-201ENSMUST00000118814 309 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm13665-201ENSMUST00000120830 528 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm12291-201ENSMUST00000121627 311 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm13570-201ENSMUST00000140763 309 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm27341-201ENSMUST00000183570 106 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm44405-201ENSMUST00000198952 126 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.13□□□□□ -0.47
Vrk1Q80X41 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk1Q80X41 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gm14277-201ENSMUST00000121195 360 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms