Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.27□□□□□ -0.45
Trim36Q80WG7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim36Q80WG7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim36Q80WG7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.26□□□□□ -0.45
Trim36Q80WG7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.26□□□□□ -0.45
Trim36Q80WG7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.26□□□□□ -0.45
Trim36Q80WG7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim36Q80WG7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.25□□□□□ -0.45
Trim36Q80WG7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim36Q80WG7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim36Q80WG7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim36Q80WG7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms