Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.23□□□□□ -0.45
Sdc3Q64519 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.23□□□□□ -0.45
Sdc3Q64519 Mir1247-201ENSMUST00000116706 82 ntBASIC12.23□□□□□ -0.45
Sdc3Q64519 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.23□□□□□ -0.45
Sdc3Q64519 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.23□□□□□ -0.45
Sdc3Q64519 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.23□□□□□ -0.45
Sdc3Q64519 Gm32025-201ENSMUST00000217960 307 ntBASIC12.23□□□□□ -0.45
Sdc3Q64519 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sdc3Q64519 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.23□□□□□ -0.45
Sdc3Q64519 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sdc3Q64519 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm14723-201ENSMUST00000118686 215 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm12502-201ENSMUST00000120197 444 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm8738-201ENSMUST00000172606 329 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Olfr284-202ENSMUST00000206647 966 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm18935-201ENSMUST00000212692 664 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.22□□□□□ -0.45
Sdc3Q64519 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sdc3Q64519 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sdc3Q64519 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Sdc3Q64519 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sdc3Q64519 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 Gm38158-201ENSMUST00000194617 339 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 Gm42627-201ENSMUST00000197347 224 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.21□□□□□ -0.45
Sdc3Q64519 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.21□□□□□ -0.45
Sdc3Q64519 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms