Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Gm5370-201ENSMUST00000187187 574 ntBASIC12.38□□□□□ -0.43
Vsx2Q61412 Gm43438-201ENSMUST00000198133 379 ntBASIC12.38□□□□□ -0.43
Vsx2Q61412 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.38□□□□□ -0.43
Vsx2Q61412 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vsx2Q61412 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.38□□□□□ -0.43
Vsx2Q61412 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vsx2Q61412 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Gm37424-201ENSMUST00000191727 561 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.37□□□□□ -0.43
Vsx2Q61412 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.37□□□□□ -0.43
Vsx2Q61412 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.37□□□□□ -0.43
Vsx2Q61412 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vsx2Q61412 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vsx2Q61412 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.36□□□□□ -0.43
Vsx2Q61412 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.36□□□□□ -0.43
Vsx2Q61412 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Gm26927-201ENSMUST00000182385 965 ntBASIC12.36□□□□□ -0.43
Vsx2Q61412 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.36□□□□□ -0.43
Vsx2Q61412 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vsx2Q61412 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vsx2Q61412 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vsx2Q61412 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms