Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.78□□□□□ -0.36
Six4Q61321 Gm45930-201ENSMUST00000221330 292 ntBASIC12.78□□□□□ -0.36
Six4Q61321 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Six4Q61321 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.78□□□□□ -0.36
Six4Q61321 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.78□□□□□ -0.36
Six4Q61321 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Six4Q61321 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Six4Q61321 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Six4Q61321 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Six4Q61321 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Six4Q61321 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Gm13786-201ENSMUST00000122371 333 ntBASIC12.77□□□□□ -0.37
Six4Q61321 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.77□□□□□ -0.37
Six4Q61321 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Six4Q61321 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Olfr284-202ENSMUST00000206647 966 ntBASIC12.77□□□□□ -0.37
Six4Q61321 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.77□□□□□ -0.37
Six4Q61321 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.77□□□□□ -0.37
Six4Q61321 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Six4Q61321 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.77□□□□□ -0.37
Six4Q61321 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Six4Q61321 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Six4Q61321 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Six4Q61321 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm24231-201ENSMUST00000104315 133 ntBASIC12.76□□□□□ -0.37
Six4Q61321 Mir1247-201ENSMUST00000116706 82 ntBASIC12.76□□□□□ -0.37
Six4Q61321 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.76□□□□□ -0.37
Six4Q61321 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.76□□□□□ -0.37
Six4Q61321 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.76□□□□□ -0.37
Six4Q61321 Gm6013-201ENSMUST00000212264 699 ntBASIC12.76□□□□□ -0.37
Six4Q61321 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm45925-201ENSMUST00000218882 744 ntBASIC12.76□□□□□ -0.37
Six4Q61321 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.76□□□□□ -0.37
Six4Q61321 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.76□□□□□ -0.37
Six4Q61321 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Six4Q61321 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Six4Q61321 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Six4Q61321 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Six4Q61321 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Six4Q61321 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Six4Q61321 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms