Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm22121-201ENSMUST00000175148 54 ntBASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm29649-201ENSMUST00000185649 419 ntBASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm8099-201ENSMUST00000200510 742 ntBASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gm5186-201ENSMUST00000218781 920 ntBASIC11.97□□□□□ -0.49
Ripk1Q60855 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.97□□□□□ -0.49
Ripk1Q60855 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ripk1Q60855 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ripk1Q60855 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.96□□□□□ -0.49
Ripk1Q60855 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ripk1Q60855 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ripk1Q60855 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Gm17208-201ENSMUST00000168388 535 ntBASIC11.96□□□□□ -0.49
Ripk1Q60855 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.96□□□□□ -0.49
Ripk1Q60855 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Mir339-201ENSMUST00000083659 96 ntBASIC11.96□□□□□ -0.49
Ripk1Q60855 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Matn2-203ENSMUST00000226766 3252 ntBASIC11.96□□□□□ -0.49
Ripk1Q60855 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.96□□□□□ -0.49
Ripk1Q60855 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ripk1Q60855 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Ripk1Q60855 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Ripk1Q60855 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ripk1Q60855 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.96□□□□□ -0.5
Ripk1Q60855 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ripk1Q60855 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ripk1Q60855 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ripk1Q60855 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms