Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SfswapQ3USH5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.11■□□□□ 0.01
SfswapQ3USH5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Gm18827-201ENSMUST00000188341 790 ntBASIC15.11■□□□□ 0.01
SfswapQ3USH5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.11■□□□□ 0.01
SfswapQ3USH5 Gm8712-201ENSMUST00000221090 701 ntBASIC15.11■□□□□ 0.01
SfswapQ3USH5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.11■□□□□ 0.01
SfswapQ3USH5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.11■□□□□ 0.01
SfswapQ3USH5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SfswapQ3USH5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.1■□□□□ 0.01
SfswapQ3USH5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm15276-201ENSMUST00000145953 498 ntBASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm38317-201ENSMUST00000195564 343 ntBASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.1■□□□□ 0.01
SfswapQ3USH5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SfswapQ3USH5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SfswapQ3USH5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.09■□□□□ 0.01
SfswapQ3USH5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SfswapQ3USH5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.09■□□□□ 0.01
SfswapQ3USH5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfswapQ3USH5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfswapQ3USH5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SfswapQ3USH5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms