Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SgcbP82349 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SgcbP82349 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SgcbP82349 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.34□□□□□ -0.59
SgcbP82349 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SgcbP82349 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SgcbP82349 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
SgcbP82349 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
SgcbP82349 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Gm13492-201ENSMUST00000119772 665 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
SgcbP82349 Gm3890-201ENSMUST00000182416 207 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.33□□□□□ -0.6
SgcbP82349 Gm43133-201ENSMUST00000197472 463 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.33□□□□□ -0.6
SgcbP82349 Gm19309-201ENSMUST00000218295 205 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Gm9823-201ENSMUST00000051212 327 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.33□□□□□ -0.6
SgcbP82349 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.33□□□□□ -0.6
SgcbP82349 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SgcbP82349 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.32□□□□□ -0.6
SgcbP82349 Gm13813-201ENSMUST00000120998 787 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.32□□□□□ -0.6
SgcbP82349 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.32□□□□□ -0.6
SgcbP82349 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Gm43377-201ENSMUST00000201640 455 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Gm18054-201ENSMUST00000207539 555 ntBASIC11.32□□□□□ -0.6
SgcbP82349 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Gm45574-201ENSMUST00000210921 331 ntBASIC11.32□□□□□ -0.6
SgcbP82349 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 Gm18363-201ENSMUST00000221671 730 ntBASIC11.32□□□□□ -0.6
SgcbP82349 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Gm7399-201ENSMUST00000032395 858 ntBASIC11.32□□□□□ -0.6
SgcbP82349 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SgcbP82349 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.32□□□□□ -0.6
SgcbP82349 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms