Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.13□□□□□ -0.47
Cdkn2bP55271 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdkn2bP55271 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gm10156-201ENSMUST00000122364 462 ntBASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gm16296-201ENSMUST00000159905 325 ntBASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gm37042-201ENSMUST00000193816 581 ntBASIC12.12□□□□□ -0.47
Cdkn2bP55271 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.12□□□□□ -0.47
Cdkn2bP55271 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.12□□□□□ -0.47
Cdkn2bP55271 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.12□□□□□ -0.47
Cdkn2bP55271 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkn2bP55271 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm8213-201ENSMUST00000118191 441 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm11637-201ENSMUST00000120601 592 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm16479-201ENSMUST00000121706 932 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm37922-201ENSMUST00000195596 455 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm45668-201ENSMUST00000211271 493 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.11□□□□□ -0.47
Cdkn2bP55271 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkn2bP55271 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkn2bP55271 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms