Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm24791-201ENSMUST00000104284 131 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Gm26013-201ENSMUST00000104404 119 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Gm25063-201ENSMUST00000104666 94 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm13019-201ENSMUST00000120000 276 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lbx1P52955 Mir7677-201ENSMUST00000184226 67 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Gm9645-201ENSMUST00000197131 792 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Gm43520-201ENSMUST00000197996 164 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Gm29763-201ENSMUST00000205306 616 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Gm44980-201ENSMUST00000205826 314 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.28□□□□□ -0.44
Lbx1P52955 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.28□□□□□ -0.44
Lbx1P52955 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.28□□□□□ -0.44
Lbx1P52955 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Lbx1P52955 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lbx1P52955 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lbx1P52955 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lbx1P52955 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lbx1P52955 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lbx1P52955 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lbx1P52955 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lbx1P52955 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.27□□□□□ -0.44
Lbx1P52955 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lbx1P52955 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm3329-201ENSMUST00000159873 556 ntBASIC12.27□□□□□ -0.45
Lbx1P52955 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.27□□□□□ -0.45
Lbx1P52955 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.27□□□□□ -0.45
Lbx1P52955 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm9507-202ENSMUST00000180157 654 ntBASIC12.27□□□□□ -0.45
Lbx1P52955 Gm9625-201ENSMUST00000180422 955 ntBASIC12.27□□□□□ -0.45
Lbx1P52955 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.27□□□□□ -0.45
Lbx1P52955 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.27□□□□□ -0.45
Lbx1P52955 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.27□□□□□ -0.45
Lbx1P52955 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.27□□□□□ -0.45
Lbx1P52955 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lbx1P52955 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lbx1P52955 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lbx1P52955 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lbx1P52955 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lbx1P52955 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Lbx1P52955 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lbx1P52955 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.26□□□□□ -0.45
Lbx1P52955 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.26□□□□□ -0.45
Lbx1P52955 Gm14999-201ENSMUST00000121039 624 ntBASIC12.26□□□□□ -0.45
Lbx1P52955 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.26□□□□□ -0.45
Lbx1P52955 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.26□□□□□ -0.45
Lbx1P52955 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.26□□□□□ -0.45
Lbx1P52955 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.26□□□□□ -0.45
Lbx1P52955 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.26□□□□□ -0.45
Lbx1P52955 Gm23085-201ENSMUST00000157849 293 ntBASIC12.26□□□□□ -0.45
Lbx1P52955 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lbx1P52955 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms