Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm45433-201ENSMUST00000209386 247 ntBASIC12.29□□□□□ -0.44
Sox18P43680 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox18P43680 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.29□□□□□ -0.44
Sox18P43680 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox18P43680 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Gm10179-201ENSMUST00000086233 688 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox18P43680 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox18P43680 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.29□□□□□ -0.44
Sox18P43680 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox18P43680 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox18P43680 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox18P43680 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox18P43680 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sox18P43680 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox18P43680 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Sox18P43680 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Matn2-206ENSMUST00000228570 2798 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Sox18P43680 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Gm13296-201ENSMUST00000117854 997 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox18P43680 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox18P43680 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox18P43680 Gm45224-201ENSMUST00000208203 414 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Gm7600-201ENSMUST00000209657 785 ntBASIC12.28□□□□□ -0.44
Sox18P43680 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox18P43680 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sox18P43680 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox18P43680 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.28□□□□□ -0.44
Sox18P43680 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox18P43680 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sox18P43680 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox18P43680 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox18P43680 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.27□□□□□ -0.45
Sox18P43680 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox18P43680 Gm24749-201ENSMUST00000157838 343 ntBASIC12.27□□□□□ -0.45
Sox18P43680 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.27□□□□□ -0.45
Sox18P43680 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Sox18P43680 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Gm9555-201ENSMUST00000200908 583 ntBASIC12.27□□□□□ -0.45
Sox18P43680 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox18P43680 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox18P43680 Gm6458-201ENSMUST00000211573 635 ntBASIC12.27□□□□□ -0.45
Sox18P43680 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.27□□□□□ -0.45
Sox18P43680 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.27□□□□□ -0.45
Sox18P43680 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox18P43680 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox18P43680 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox18P43680 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms