Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Lig1P37913 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lig1P37913 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.44□□□□□ -0.1
Lig1P37913 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.44□□□□□ -0.1
Lig1P37913 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Lig1P37913 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lig1P37913 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Lig1P37913 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lig1P37913 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.44□□□□□ -0.1
Lig1P37913 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.44□□□□□ -0.1
Lig1P37913 Gm7857-201ENSMUST00000117957 358 ntBASIC14.44□□□□□ -0.1
Lig1P37913 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Lig1P37913 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.44□□□□□ -0.1
Lig1P37913 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Lig1P37913 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lig1P37913 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.44□□□□□ -0.1
Lig1P37913 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lig1P37913 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lig1P37913 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lig1P37913 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.43□□□□□ -0.1
Lig1P37913 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.43□□□□□ -0.1
Lig1P37913 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.43□□□□□ -0.1
Lig1P37913 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.43□□□□□ -0.1
Lig1P37913 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Mir5120-201ENSMUST00000175020 78 ntBASIC14.43□□□□□ -0.1
Lig1P37913 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.43□□□□□ -0.1
Lig1P37913 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Gm10312-201ENSMUST00000078515 489 ntBASIC14.43□□□□□ -0.1
Lig1P37913 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Lig1P37913 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.43□□□□□ -0.1
Lig1P37913 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lig1P37913 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lig1P37913 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Lig1P37913 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Lig1P37913 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.42□□□□□ -0.1
Lig1P37913 Gm44651-201ENSMUST00000207343 372 ntBASIC14.42□□□□□ -0.1
Lig1P37913 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.42□□□□□ -0.1
Lig1P37913 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.42□□□□□ -0.1
Lig1P37913 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.42□□□□□ -0.1
Lig1P37913 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lig1P37913 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lig1P37913 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lig1P37913 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms