Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Foxa1P35582 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Foxa1P35582 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Foxa1P35582 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.73□□□□□ -0.53
Foxa1P35582 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Foxa1P35582 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxa1P35582 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Foxa1P35582 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.72□□□□□ -0.53
Foxa1P35582 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Foxa1P35582 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.72□□□□□ -0.53
Foxa1P35582 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.72□□□□□ -0.53
Foxa1P35582 Gm5904-201ENSMUST00000210286 865 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Gm45880-201ENSMUST00000213041 853 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.72□□□□□ -0.53
Foxa1P35582 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.72□□□□□ -0.53
Foxa1P35582 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxa1P35582 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxa1P35582 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Foxa1P35582 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Foxa1P35582 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Foxa1P35582 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Foxa1P35582 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.71□□□□□ -0.53
Foxa1P35582 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.71□□□□□ -0.53
Foxa1P35582 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Foxa1P35582 Gm27572-201ENSMUST00000183702 255 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Foxa1P35582 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.71□□□□□ -0.53
Foxa1P35582 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxa1P35582 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Foxa1P35582 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Foxa1P35582 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms